Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcb1Q9Z0H3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Gm22189-201ENSMUST00000103822 86 ntBASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Gm9522-201ENSMUST00000182394 926 ntBASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcb1Q9Z0H3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Gm21854-201ENSMUST00000179901 471 ntBASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smarcb1Q9Z0H3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcb1Q9Z0H3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms