Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Gm37714-201ENSMUST00000194742 342 ntBASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn8aQ9WTU3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Gm5279-201ENSMUST00000199575 745 ntBASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn8aQ9WTU3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Gm18624-201ENSMUST00000220966 658 ntBASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Syt7-205ENSMUST00000224135 1557 ntBASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn8aQ9WTU3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms