Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trex2Q9R1A9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.15□□□□□ -0.47
Trex2Q9R1A9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trex2Q9R1A9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trex2Q9R1A9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trex2Q9R1A9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Mir3113-201ENSMUST00000175478 76 ntBASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Mir8117-201ENSMUST00000184773 107 ntBASIC12.14□□□□□ -0.47
Trex2Q9R1A9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.14□□□□□ -0.47
Trex2Q9R1A9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Gm11779-201ENSMUST00000118541 368 ntBASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Gm5177-201ENSMUST00000183092 997 ntBASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Gm10154-201ENSMUST00000084445 354 ntBASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trex2Q9R1A9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trex2Q9R1A9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms