Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.09□□□□□ -0.15
Col4a4Q9QZR9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col4a4Q9QZR9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col4a4Q9QZR9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Col4a4Q9QZR9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Gm14350-201ENSMUST00000116642 640 ntBASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Gm13297-201ENSMUST00000120205 934 ntBASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Gm16479-201ENSMUST00000121706 932 ntBASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a4Q9QZR9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Gm22902-201ENSMUST00000158488 302 ntBASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Col4a4Q9QZR9 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms