Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcf1Q9QZM3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clcf1Q9QZM3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clcf1Q9QZM3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.08□□□□□ -0.31
Clcf1Q9QZM3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Clcf1Q9QZM3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clcf1Q9QZM3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Clcf1Q9QZM3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Clcf1Q9QZM3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clcf1Q9QZM3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Clcf1Q9QZM3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clcf1Q9QZM3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 AA543401-201ENSMUST00000164248 1269 ntBASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Gm22175-201ENSMUST00000175007 78 ntBASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Gm38225-201ENSMUST00000194001 393 ntBASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.08□□□□□ -0.32
Clcf1Q9QZM3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms