Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Crlf1Q9JM58 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Gm40466-201ENSMUST00000212174 422 ntBASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Crlf1Q9JM58 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Gm27514-201ENSMUST00000183692 110 ntBASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Gm43822-201ENSMUST00000200285 476 ntBASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Olfr286-202ENSMUST00000205305 969 ntBASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Crlf1Q9JM58 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms