Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Mir1894-201ENSMUST00000122802 81 ntBASIC14.18□□□□□ -0.14
OtofQ9ESF1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
OtofQ9ESF1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
OtofQ9ESF1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.17□□□□□ -0.14
OtofQ9ESF1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
OtofQ9ESF1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.17□□□□□ -0.14
OtofQ9ESF1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
OtofQ9ESF1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Gm11524-201ENSMUST00000119349 807 ntBASIC14.16□□□□□ -0.14
OtofQ9ESF1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.16□□□□□ -0.14
OtofQ9ESF1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Gm27701-201ENSMUST00000184498 110 ntBASIC14.16□□□□□ -0.14
OtofQ9ESF1 Gm2495-201ENSMUST00000191160 466 ntBASIC14.16□□□□□ -0.14
OtofQ9ESF1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.16□□□□□ -0.14
OtofQ9ESF1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.16□□□□□ -0.14
OtofQ9ESF1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.16□□□□□ -0.14
OtofQ9ESF1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Mir497b-201ENSMUST00000093601 125 ntBASIC14.16□□□□□ -0.14
OtofQ9ESF1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
OtofQ9ESF1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.15□□□□□ -0.14
OtofQ9ESF1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.15□□□□□ -0.14
OtofQ9ESF1 Gm19220-201ENSMUST00000222682 803 ntBASIC14.15□□□□□ -0.14
OtofQ9ESF1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
OtofQ9ESF1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms