Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Gm9002-201ENSMUST00000178437 499 ntBASIC14.06□□□□□ -0.16
Rrp8Q9DB85 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rrp8Q9DB85 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Gm5354-201ENSMUST00000182417 973 ntBASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Gm6266-201ENSMUST00000203844 806 ntBASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Gm44719-201ENSMUST00000206404 149 ntBASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp8Q9DB85 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Gm10275-202ENSMUST00000168697 495 ntBASIC14.04□□□□□ -0.16
Rrp8Q9DB85 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Gm10275-201ENSMUST00000092620 635 ntBASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp8Q9DB85 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp8Q9DB85 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms