Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp4bQ9D8B3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp4bQ9D8B3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp4bQ9D8B3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp4bQ9D8B3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp4bQ9D8B3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp4bQ9D8B3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Chmp4bQ9D8B3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp4bQ9D8B3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp4bQ9D8B3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp4bQ9D8B3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp4bQ9D8B3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.08■□□□□ 0.49
Chmp4bQ9D8B3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp4bQ9D8B3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms