Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Gm13464-201ENSMUST00000119418 935 ntBASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp4cQ9D7F7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Matn2-206ENSMUST00000228570 2798 ntBASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Gm14140-201ENSMUST00000119999 995 ntBASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Gm45747-201ENSMUST00000212203 999 ntBASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp4cQ9D7F7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Gm5364-201ENSMUST00000216789 889 ntBASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.21■□□□□ 0.35
Chmp4cQ9D7F7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Chmp4cQ9D7F7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Gm27301-201ENSMUST00000184012 127 ntBASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.2■□□□□ 0.34
Chmp4cQ9D7F7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms