Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim42Q9D2H5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.41□□□□□ -0.1
Trim42Q9D2H5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim42Q9D2H5 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim42Q9D2H5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim42Q9D2H5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim42Q9D2H5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms