Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Upk1aQ9D132 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.64□□□□□ -0.23
Upk1aQ9D132 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Gm17971-201ENSMUST00000190239 806 ntBASIC13.63□□□□□ -0.23
Upk1aQ9D132 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.63□□□□□ -0.23
Upk1aQ9D132 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Upk1aQ9D132 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.63□□□□□ -0.23
Upk1aQ9D132 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upk1aQ9D132 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.62□□□□□ -0.23
Upk1aQ9D132 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.62□□□□□ -0.23
Upk1aQ9D132 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Gm7153-201ENSMUST00000117092 455 ntBASIC13.62□□□□□ -0.23
Upk1aQ9D132 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.62□□□□□ -0.23
Upk1aQ9D132 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Gm37230-201ENSMUST00000194491 818 ntBASIC13.62□□□□□ -0.23
Upk1aQ9D132 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Upk1aQ9D132 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.62□□□□□ -0.23
Upk1aQ9D132 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Upk1aQ9D132 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms