Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.32□□□□□ -0.28
Trim13Q9CYB0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim13Q9CYB0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.31□□□□□ -0.28
Trim13Q9CYB0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Gm4535-201ENSMUST00000182274 558 ntBASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Gm17971-201ENSMUST00000190239 806 ntBASIC13.31□□□□□ -0.28
Trim13Q9CYB0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Gm10355-201ENSMUST00000097146 517 ntBASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim13Q9CYB0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms