Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm18515-201ENSMUST00000219755 797 ntBASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Otud1Q9CUB6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Otud1Q9CUB6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Gm12428-201ENSMUST00000119844 727 ntBASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.6□□□□□ -0.23
Otud1Q9CUB6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Gm27306-201ENSMUST00000183970 107 ntBASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Gm45453-201ENSMUST00000211758 853 ntBASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Gm9063-201ENSMUST00000223299 582 ntBASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Otud1Q9CUB6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Otud1Q9CUB6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms