Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm19078-201ENSMUST00000206311 727 ntBASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Gm11524-201ENSMUST00000119349 807 ntBASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Gm5370-201ENSMUST00000187187 574 ntBASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Gm7399-201ENSMUST00000032395 858 ntBASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldnd1Q9CQX5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Gm40466-201ENSMUST00000212174 422 ntBASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldnd1Q9CQX5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Prob1-201ENSMUST00000097619 3021 ntBASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms