Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb1Q9CQ70 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Gm9727-201ENSMUST00000161387 555 ntBASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
H2afb1Q9CQ70 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb1Q9CQ70 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
H2afb1Q9CQ70 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
H2afb1Q9CQ70 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
H2afb1Q9CQ70 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Gm1401-201ENSMUST00000122048 772 ntBASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Gm17968-201ENSMUST00000194902 784 ntBASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
H2afb1Q9CQ70 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Mir8117-201ENSMUST00000184773 107 ntBASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb1Q9CQ70 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms