Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim34aQ99PP6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Gm12341-201ENSMUST00000119724 503 ntBASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Gm5425-201ENSMUST00000214125 459 ntBASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim34aQ99PP6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Gm9002-201ENSMUST00000178437 499 ntBASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim34aQ99PP6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Gm5279-201ENSMUST00000199575 745 ntBASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Gm17795-201ENSMUST00000214505 757 ntBASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim34aQ99PP6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim34aQ99PP6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim34aQ99PP6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim34aQ99PP6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim34aQ99PP6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim34aQ99PP6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trim34aQ99PP6 Gm15824-201ENSMUST00000119516 955 ntBASIC17.65■□□□□ 0.42
Trim34aQ99PP6 Gm13829-201ENSMUST00000119600 138 ntBASIC17.65■□□□□ 0.42
Trim34aQ99PP6 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms