Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Gm27838-201ENSMUST00000184829 128 ntBASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.42■□□□□ 0.06
Cntnap4Q99P47 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cntnap4Q99P47 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Syt7-204ENSMUST00000223586 1344 ntBASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Gm4875-201ENSMUST00000118257 786 ntBASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Mir3102-201ENSMUST00000175555 104 ntBASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Mir125a-201ENSMUST00000083545 68 ntBASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cntnap4Q99P47 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Cntnap4Q99P47 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Gm14928-201ENSMUST00000120198 477 ntBASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Gm15321-201ENSMUST00000121290 288 ntBASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Gm16215-201ENSMUST00000161990 637 ntBASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Gm10275-202ENSMUST00000168697 495 ntBASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Gm24694-201ENSMUST00000180054 110 ntBASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Gm27663-201ENSMUST00000184839 110 ntBASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cntnap4Q99P47 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms