Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Gm5177-201ENSMUST00000183092 997 ntBASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf111Q99ML9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Rnf111Q99ML9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rnf111Q99ML9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.18
Rnf111Q99ML9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rnf111Q99ML9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.96□□□□□ -0.18
Rnf111Q99ML9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.96□□□□□ -0.18
Rnf111Q99ML9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Rnf111Q99ML9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rnf111Q99ML9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Thap2-203ENSMUST00000218989 527 ntBASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf111Q99ML9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Gm27525-201ENSMUST00000184465 107 ntBASIC13.94□□□□□ -0.18
Rnf111Q99ML9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rnf111Q99ML9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms