Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkd1Q99MH6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkd1Q99MH6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkd1Q99MH6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkd1Q99MH6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Gm8749-201ENSMUST00000117737 331 ntBASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Gm27300-201ENSMUST00000184085 97 ntBASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Gm27335-201ENSMUST00000184758 97 ntBASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
Nkd1Q99MH6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkd1Q99MH6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.23
Nkd1Q99MH6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Nkd1Q99MH6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Nkd1Q99MH6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Mir5131-201ENSMUST00000175426 93 ntBASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.58□□□□□ -0.24
Nkd1Q99MH6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Gm18195-201ENSMUST00000207604 706 ntBASIC13.58□□□□□ -0.24
Nkd1Q99MH6 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkd1Q99MH6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkd1Q99MH6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms