Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
RtcbQ99LF4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RtcbQ99LF4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.65■□□□□ 0.42
RtcbQ99LF4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.65■□□□□ 0.42
RtcbQ99LF4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RtcbQ99LF4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RtcbQ99LF4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RtcbQ99LF4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RtcbQ99LF4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RtcbQ99LF4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RtcbQ99LF4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.64■□□□□ 0.41
RtcbQ99LF4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RtcbQ99LF4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.63■□□□□ 0.41
RtcbQ99LF4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RtcbQ99LF4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Gm43179-201ENSMUST00000198797 275 ntBASIC17.63■□□□□ 0.41
RtcbQ99LF4 Gm44608-201ENSMUST00000206827 855 ntBASIC17.63■□□□□ 0.41
RtcbQ99LF4 Gm18027-201ENSMUST00000218947 619 ntBASIC17.63■□□□□ 0.41
RtcbQ99LF4 Gm9257-201ENSMUST00000221254 232 ntBASIC17.63■□□□□ 0.41
RtcbQ99LF4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RtcbQ99LF4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RtcbQ99LF4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RtcbQ99LF4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RtcbQ99LF4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms