Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.62■□□□□ 0.25
Smc1bQ920F6 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.62■□□□□ 0.25
Smc1bQ920F6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.62■□□□□ 0.25
Smc1bQ920F6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.61■□□□□ 0.25
Smc1bQ920F6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.61■□□□□ 0.25
Smc1bQ920F6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Gm6745-201ENSMUST00000199216 526 ntBASIC16.61■□□□□ 0.25
Smc1bQ920F6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc1bQ920F6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.6■□□□□ 0.25
Smc1bQ920F6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Gm11478-201ENSMUST00000117851 599 ntBASIC16.6■□□□□ 0.25
Smc1bQ920F6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Gm27920-201ENSMUST00000183953 96 ntBASIC16.6■□□□□ 0.25
Smc1bQ920F6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Smc1bQ920F6 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.59■□□□□ 0.25
Smc1bQ920F6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Gm8515-201ENSMUST00000194852 576 ntBASIC16.59■□□□□ 0.25
Smc1bQ920F6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Gm6218-201ENSMUST00000219812 628 ntBASIC16.59■□□□□ 0.25
Smc1bQ920F6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1bQ920F6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms