Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Gm27430-201ENSMUST00000184585 107 ntBASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 AA619741-201ENSMUST00000195095 646 ntBASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Gm44333-201ENSMUST00000197168 107 ntBASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha9Q91Y11 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Gm25948-201ENSMUST00000175334 112 ntBASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Gm27631-201ENSMUST00000184163 466 ntBASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha9Q91Y11 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Gm45453-201ENSMUST00000211758 853 ntBASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha9Q91Y11 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 BC001981-202ENSMUST00000191393 1545 ntBASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha9Q91Y11 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms