Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Mir5126-201ENSMUST00000175513 77 ntBASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Gm18622-201ENSMUST00000219361 595 ntBASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 AC114573.1-201ENSMUST00000224120 1210 ntBASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhb3Q91XZ7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Gm13899-201ENSMUST00000121519 1255 ntBASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 AC132446.1-201ENSMUST00000222655 226 ntBASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 AC124408.1-201ENSMUST00000228938 707 ntBASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhb3Q91XZ7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms