Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb4Q91XZ6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Gm16198-201ENSMUST00000118766 670 ntBASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Gm13464-201ENSMUST00000119418 935 ntBASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Gm14140-201ENSMUST00000119999 995 ntBASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb4Q91XZ6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Gm16026-204ENSMUST00000162652 683 ntBASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb4Q91XZ6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Gm5177-201ENSMUST00000183092 997 ntBASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Psmb5-202ENSMUST00000227257 622 ntBASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb4Q91XZ6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms