Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb6Q91XZ4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb6Q91XZ4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb6Q91XZ4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb6Q91XZ4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb6Q91XZ4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb6Q91XZ4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb6Q91XZ4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb6Q91XZ4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb6Q91XZ4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb6Q91XZ4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Gm43125-201ENSMUST00000201724 730 ntBASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb6Q91XZ4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb6Q91XZ4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Gm27397-201ENSMUST00000184997 107 ntBASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Gm44335-201ENSMUST00000196879 141 ntBASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Gm44297-201ENSMUST00000198304 141 ntBASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Gm44346-201ENSMUST00000198851 141 ntBASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb6Q91XZ4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Gm2756-201ENSMUST00000195851 400 ntBASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb6Q91XZ4 Chchd1-203ENSMUST00000224633 557 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms