Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb8Q91XZ2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb8Q91XZ2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb8Q91XZ2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb8Q91XZ2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Gm15467-201ENSMUST00000120582 445 ntBASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Gm37230-201ENSMUST00000194491 818 ntBASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 AW822252-206ENSMUST00000208904 237 ntBASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.08□□□□□ -0.16
Pcdhb8Q91XZ2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Gm14494-201ENSMUST00000118786 435 ntBASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb8Q91XZ2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Gm27920-201ENSMUST00000183953 96 ntBASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms