Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TraipQ8VIG6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.29■□□□□ 0.04
TraipQ8VIG6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC15.29■□□□□ 0.04
TraipQ8VIG6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.29■□□□□ 0.04
TraipQ8VIG6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Gm15823-201ENSMUST00000064305 670 ntBASIC15.29■□□□□ 0.04
TraipQ8VIG6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TraipQ8VIG6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Gm42941-201ENSMUST00000200347 1321 ntBASIC15.28■□□□□ 0.04
TraipQ8VIG6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.28■□□□□ 0.04
TraipQ8VIG6 Gm21470-201ENSMUST00000187680 696 ntBASIC15.28■□□□□ 0.04
TraipQ8VIG6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Gm9797-201ENSMUST00000052902 613 ntBASIC15.28■□□□□ 0.04
TraipQ8VIG6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TraipQ8VIG6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TraipQ8VIG6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TraipQ8VIG6 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.27■□□□□ 0.04
TraipQ8VIG6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TraipQ8VIG6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TraipQ8VIG6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TraipQ8VIG6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TraipQ8VIG6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TraipQ8VIG6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TraipQ8VIG6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.27■□□□□ 0.03
TraipQ8VIG6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.26■□□□□ 0.03
TraipQ8VIG6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.26■□□□□ 0.03
TraipQ8VIG6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.26■□□□□ 0.03
TraipQ8VIG6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms