Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.91□□□□□ -0.02
Trim60Q8VI40 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Mir5131-201ENSMUST00000175426 93 ntBASIC14.9□□□□□ -0.02
Trim60Q8VI40 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Thap2-203ENSMUST00000218989 527 ntBASIC14.9□□□□□ -0.02
Trim60Q8VI40 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.9□□□□□ -0.02
Trim60Q8VI40 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim60Q8VI40 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Gm16198-201ENSMUST00000118766 670 ntBASIC14.89□□□□□ -0.03
Trim60Q8VI40 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.89□□□□□ -0.03
Trim60Q8VI40 Gm45747-201ENSMUST00000212203 999 ntBASIC14.89□□□□□ -0.03
Trim60Q8VI40 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim60Q8VI40 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.88□□□□□ -0.03
Trim60Q8VI40 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.88□□□□□ -0.03
Trim60Q8VI40 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trim60Q8VI40 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms