Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpa1Q8VEE4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpa1Q8VEE4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpa1Q8VEE4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpa1Q8VEE4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpa1Q8VEE4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
Rpa1Q8VEE4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpa1Q8VEE4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpa1Q8VEE4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.08
Rpa1Q8VEE4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpa1Q8VEE4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rpa1Q8VEE4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Rpa1Q8VEE4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Gm18489-201ENSMUST00000172565 551 ntBASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Gm18669-201ENSMUST00000216049 778 ntBASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpa1Q8VEE4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Gm9726-201ENSMUST00000180321 678 ntBASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Ank2-226ENSMUST00000189368 339 ntBASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpa1Q8VEE4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms