Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Q8VDP2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.06□□□□□ -0.16
Q8VDP2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Gm24841-201ENSMUST00000158676 357 ntBASIC14.06□□□□□ -0.16
Q8VDP2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Q8VDP2 Gm18032-201ENSMUST00000222541 538 ntBASIC14.06□□□□□ -0.16
Q8VDP2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.06□□□□□ -0.16
Q8VDP2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Q8VDP2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Q8VDP2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.06□□□□□ -0.16
Q8VDP2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Q8VDP2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Q8VDP2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q8VDP2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.05□□□□□ -0.16
Q8VDP2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Q8VDP2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 AA414768-201ENSMUST00000121924 1257 ntBASIC14.05□□□□□ -0.16
Q8VDP2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Gm23634-201ENSMUST00000175071 91 ntBASIC14.05□□□□□ -0.16
Q8VDP2 Gm21362-201ENSMUST00000194272 928 ntBASIC14.05□□□□□ -0.16
Q8VDP2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.05□□□□□ -0.16
Q8VDP2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.05□□□□□ -0.16
Q8VDP2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q8VDP2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Q8VDP2 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.04□□□□□ -0.16
Q8VDP2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Q8VDP2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Q8VDP2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Q8VDP2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Gm7638-201ENSMUST00000121348 967 ntBASIC14.04□□□□□ -0.16
Q8VDP2 Gm22697-201ENSMUST00000175194 63 ntBASIC14.04□□□□□ -0.16
Q8VDP2 Gm37025-201ENSMUST00000195159 829 ntBASIC14.04□□□□□ -0.16
Q8VDP2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Gm7367-201ENSMUST00000057611 492 ntBASIC14.04□□□□□ -0.16
Q8VDP2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Q8VDP2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Q8VDP2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Q8VDP2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.04□□□□□ -0.16
Q8VDP2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Q8VDP2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Q8VDP2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q8VDP2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.03□□□□□ -0.16
Q8VDP2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q8VDP2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms