Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Gm45747-201ENSMUST00000212203 999 ntBASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Gm7461-201ENSMUST00000058918 827 ntBASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vps39Q8R5L3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Gm1401-201ENSMUST00000122048 772 ntBASIC14.42□□□□□ -0.1
Vps39Q8R5L3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Gm9727-201ENSMUST00000161387 555 ntBASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vps39Q8R5L3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Gm9385-201ENSMUST00000117563 472 ntBASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Gm5479-201ENSMUST00000160578 435 ntBASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms