Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc59Q8R2N0 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Gm8000-201ENSMUST00000188378 592 ntBASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Gm5364-201ENSMUST00000216789 889 ntBASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Psmb5-202ENSMUST00000227257 622 ntBASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Gm15590-201ENSMUST00000078419 552 ntBASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc59Q8R2N0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc59Q8R2N0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Gm13036-201ENSMUST00000117799 748 ntBASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Gm2213-201ENSMUST00000197485 688 ntBASIC13.64□□□□□ -0.23
Ccdc59Q8R2N0 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms