Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp7Q8R1T1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Gm4804-201ENSMUST00000182234 999 ntBASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp7Q8R1T1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.34■□□□□ 0.53
Chmp7Q8R1T1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp7Q8R1T1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp7Q8R1T1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp7Q8R1T1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp7Q8R1T1 Gm15806-201ENSMUST00000120696 955 ntBASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Gm5425-201ENSMUST00000214125 459 ntBASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Chmp7Q8R1T1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Gm12341-201ENSMUST00000119724 503 ntBASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp7Q8R1T1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp7Q8R1T1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp7Q8R1T1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Chmp7Q8R1T1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp7Q8R1T1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.31■□□□□ 0.52
Chmp7Q8R1T1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp7Q8R1T1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.31■□□□□ 0.52
Chmp7Q8R1T1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms