Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44357-201ENSMUST00000195897 142 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm19658-201ENSMUST00000196231 138 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44367-201ENSMUST00000196836 138 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44350-201ENSMUST00000197197 138 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44390-201ENSMUST00000197533 144 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44313-201ENSMUST00000198018 138 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44486-201ENSMUST00000198508 138 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44314-201ENSMUST00000199263 138 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44394-201ENSMUST00000199558 138 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44484-201ENSMUST00000199873 138 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44466-201ENSMUST00000200264 138 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm44359-201ENSMUST00000200671 138 ntBASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd3Q8R1N4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Nudcd3Q8R1N4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Gm25990-201ENSMUST00000102440 86 ntBASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Gm7222-201ENSMUST00000117512 906 ntBASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Mir7071-201ENSMUST00000184847 69 ntBASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd3Q8R1N4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Gm14042-201ENSMUST00000120139 833 ntBASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd3Q8R1N4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nudcd3Q8R1N4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nudcd3Q8R1N4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.37□□□□□ -0.11
Nudcd3Q8R1N4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Nudcd3Q8R1N4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Nudcd3Q8R1N4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nudcd3Q8R1N4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nudcd3Q8R1N4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Nudcd3Q8R1N4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms