Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.08■□□□□ 0
Vopp1Q8R1C3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vopp1Q8R1C3 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.07■□□□□ 0
Vopp1Q8R1C3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Gm24420-201ENSMUST00000176676 59 ntBASIC15.07■□□□□ 0
Vopp1Q8R1C3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Gm6266-201ENSMUST00000203844 806 ntBASIC15.07■□□□□ 0
Vopp1Q8R1C3 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.07■□□□□ 0
Vopp1Q8R1C3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vopp1Q8R1C3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.06■□□□□ 0
Vopp1Q8R1C3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.06■□□□□ 0
Vopp1Q8R1C3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.06■□□□□ 0
Vopp1Q8R1C3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vopp1Q8R1C3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vopp1Q8R1C3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Vopp1Q8R1C3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.05■□□□□ 0
Vopp1Q8R1C3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vopp1Q8R1C3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vopp1Q8R1C3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vopp1Q8R1C3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Gm6244-201ENSMUST00000178732 841 ntBASIC15.05■□□□□ -0
Vopp1Q8R1C3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.05■□□□□ -0
Vopp1Q8R1C3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vopp1Q8R1C3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vopp1Q8R1C3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms