Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Sf3a1Q8K4Z5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm25948-201ENSMUST00000175334 112 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm29310-201ENSMUST00000185468 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21825-201ENSMUST00000185728 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm29109-201ENSMUST00000185895 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21896-201ENSMUST00000186520 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21873-201ENSMUST00000186728 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21794-201ENSMUST00000187056 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21880-201ENSMUST00000187275 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21826-201ENSMUST00000187451 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21198-201ENSMUST00000188393 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21749-201ENSMUST00000189343 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21901-201ENSMUST00000189568 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm29424-201ENSMUST00000189716 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm18766-201ENSMUST00000189811 808 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm28599-201ENSMUST00000189838 694 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21867-201ENSMUST00000189917 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm29269-201ENSMUST00000190087 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21722-201ENSMUST00000190153 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm28423-201ENSMUST00000190701 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21899-201ENSMUST00000190745 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21910-201ENSMUST00000191163 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21849-201ENSMUST00000191571 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm28678-201ENSMUST00000191593 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm20910-201ENSMUST00000193268 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Gm21871-201ENSMUST00000194621 696 ntBASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sf3a1Q8K4Z5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Gm13823-201ENSMUST00000119930 345 ntBASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sf3a1Q8K4Z5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Gm15693-201ENSMUST00000120470 637 ntBASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3a1Q8K4Z5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms