Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Gm27702-201ENSMUST00000184512 56 ntBASIC13.6□□□□□ -0.23
Clrn1Q8K445 Gm37935-201ENSMUST00000192012 982 ntBASIC13.6□□□□□ -0.23
Clrn1Q8K445 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.6□□□□□ -0.23
Clrn1Q8K445 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.6□□□□□ -0.23
Clrn1Q8K445 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn1Q8K445 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm2810-201ENSMUST00000118681 990 ntBASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm38225-201ENSMUST00000194001 393 ntBASIC13.59□□□□□ -0.23
Clrn1Q8K445 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.59□□□□□ -0.23
Clrn1Q8K445 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.59□□□□□ -0.23
Clrn1Q8K445 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clrn1Q8K445 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Clrn1Q8K445 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Clrn1Q8K445 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.23
Clrn1Q8K445 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Gm14042-201ENSMUST00000120139 833 ntBASIC13.58□□□□□ -0.24
Clrn1Q8K445 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.58□□□□□ -0.24
Clrn1Q8K445 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms