Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.72□□□□□ -0.05
CopaQ8CIE6 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.72□□□□□ -0.05
CopaQ8CIE6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CopaQ8CIE6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.71□□□□□ -0.05
CopaQ8CIE6 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.71□□□□□ -0.05
CopaQ8CIE6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.71□□□□□ -0.05
CopaQ8CIE6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CopaQ8CIE6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CopaQ8CIE6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CopaQ8CIE6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CopaQ8CIE6 Carlr-201ENSMUST00000181515 2574 ntBASIC14.71□□□□□ -0.06
CopaQ8CIE6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Gm25287-201ENSMUST00000103846 110 ntBASIC14.7□□□□□ -0.06
CopaQ8CIE6 Gm22918-201ENSMUST00000103855 110 ntBASIC14.7□□□□□ -0.06
CopaQ8CIE6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CopaQ8CIE6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CopaQ8CIE6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms