Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.65■□□□□ 0.42
Trim52Q8CDV4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim52Q8CDV4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Trim52Q8CDV4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trim52Q8CDV4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Gm13385-201ENSMUST00000121089 220 ntBASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Gm8602-201ENSMUST00000184045 607 ntBASIC17.64■□□□□ 0.41
Trim52Q8CDV4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.64■□□□□ 0.41
Trim52Q8CDV4 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim52Q8CDV4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Gm18307-201ENSMUST00000206864 949 ntBASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Gm5035-201ENSMUST00000215581 927 ntBASIC17.63■□□□□ 0.41
Trim52Q8CDV4 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim52Q8CDV4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms