Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Gm7063-201ENSMUST00000186840 981 ntBASIC13.95□□□□□ -0.18
SynpoQ8CC35 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.94□□□□□ -0.18
SynpoQ8CC35 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Gm24158-201ENSMUST00000175263 71 ntBASIC13.94□□□□□ -0.18
SynpoQ8CC35 Gm25948-201ENSMUST00000175334 112 ntBASIC13.94□□□□□ -0.18
SynpoQ8CC35 Gm7774-201ENSMUST00000200064 533 ntBASIC13.94□□□□□ -0.18
SynpoQ8CC35 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.94□□□□□ -0.18
SynpoQ8CC35 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SynpoQ8CC35 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.93□□□□□ -0.18
SynpoQ8CC35 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Mir449b-201ENSMUST00000104833 80 ntBASIC13.93□□□□□ -0.18
SynpoQ8CC35 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SynpoQ8CC35 Gm27430-201ENSMUST00000184585 107 ntBASIC13.93□□□□□ -0.18
SynpoQ8CC35 Gm10253-201ENSMUST00000194270 940 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms