Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chd9Q8BYH8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Gm27331-201ENSMUST00000183705 60 ntBASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.2□□□□□ -0.62
Chd9Q8BYH8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Gm18584-201ENSMUST00000203098 964 ntBASIC11.2□□□□□ -0.62
Chd9Q8BYH8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chd9Q8BYH8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Gm12241-201ENSMUST00000118330 726 ntBASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Gm20482-202ENSMUST00000174729 825 ntBASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Gm5051-201ENSMUST00000204085 485 ntBASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Gm2451-201ENSMUST00000199447 999 ntBASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Gm10290-201ENSMUST00000200451 999 ntBASIC11.19□□□□□ -0.62
Chd9Q8BYH8 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Chd9Q8BYH8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gm10752-201ENSMUST00000218348 729 ntBASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd9Q8BYH8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms