Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ube3dQ8BX13 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Gm18889-201ENSMUST00000174284 929 ntBASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Mir6990-201ENSMUST00000183724 91 ntBASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Gm5312-201ENSMUST00000203728 547 ntBASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube3dQ8BX13 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.79□□□□□ -0.36
Ube3dQ8BX13 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Gm15920-201ENSMUST00000118998 402 ntBASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms