Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.4■□□□□ 0.22
Scfd1Q8BRF7 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.4■□□□□ 0.22
Scfd1Q8BRF7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.4■□□□□ 0.22
Scfd1Q8BRF7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scfd1Q8BRF7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scfd1Q8BRF7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.4■□□□□ 0.22
Scfd1Q8BRF7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scfd1Q8BRF7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scfd1Q8BRF7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scfd1Q8BRF7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Gm9794-201ENSMUST00000202370 423 ntBASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Scfd1Q8BRF7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Gm4804-201ENSMUST00000182234 999 ntBASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Scfd1Q8BRF7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scfd1Q8BRF7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Gm12490-201ENSMUST00000120255 560 ntBASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.36■□□□□ 0.21
Scfd1Q8BRF7 Gm37917-201ENSMUST00000194711 392 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms