Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Gm8213-201ENSMUST00000118191 441 ntBASIC20.12■□□□□ 0.81
Usp54Q8BL06 Gm4271-201ENSMUST00000174444 973 ntBASIC20.12■□□□□ 0.81
Usp54Q8BL06 Gm2445-201ENSMUST00000182798 989 ntBASIC20.12■□□□□ 0.81
Usp54Q8BL06 Gm8565-201ENSMUST00000183259 1014 ntBASIC20.12■□□□□ 0.81
Usp54Q8BL06 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC20.12■□□□□ 0.81
Usp54Q8BL06 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC20.12■□□□□ 0.81
Usp54Q8BL06 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp54Q8BL06 AC126549.2-201ENSMUST00000223997 1976 ntBASIC20.11■□□□□ 0.81
Usp54Q8BL06 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Gm42929-201ENSMUST00000198374 1286 ntBASIC20.11■□□□□ 0.81
Usp54Q8BL06 AC155237.1-201ENSMUST00000226196 1279 ntBASIC20.11■□□□□ 0.81
Usp54Q8BL06 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Usp54Q8BL06 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Gm5940-201ENSMUST00000117582 1068 ntBASIC20.1■□□□□ 0.81
Usp54Q8BL06 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Gm29705-201ENSMUST00000212598 474 ntBASIC20.1■□□□□ 0.81
Usp54Q8BL06 Gm7172-201ENSMUST00000218047 1152 ntBASIC20.1■□□□□ 0.81
Usp54Q8BL06 Gm7399-201ENSMUST00000032395 858 ntBASIC20.1■□□□□ 0.81
Usp54Q8BL06 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Olfr582-201ENSMUST00000098212 960 ntBASIC20.1■□□□□ 0.81
Usp54Q8BL06 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp54Q8BL06 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Gm14723-201ENSMUST00000118686 215 ntBASIC20.09■□□□□ 0.81
Usp54Q8BL06 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Usp54Q8BL06 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp54Q8BL06 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Gm19184-201ENSMUST00000196798 928 ntBASIC20.08■□□□□ 0.81
Usp54Q8BL06 CU024892.2-201ENSMUST00000224608 832 ntBASIC20.08■□□□□ 0.81
Usp54Q8BL06 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp54Q8BL06 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp54Q8BL06 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp54Q8BL06 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp54Q8BL06 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Usp54Q8BL06 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp54Q8BL06 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC20.08■□□□□ 0.8
Usp54Q8BL06 Gm5687-201ENSMUST00000118252 640 ntBASIC20.08■□□□□ 0.8
Usp54Q8BL06 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC20.08■□□□□ 0.8
Usp54Q8BL06 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms