Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdhr3Q8BL00 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdhr3Q8BL00 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdhr3Q8BL00 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdhr3Q8BL00 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdhr3Q8BL00 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdhr3Q8BL00 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdhr3Q8BL00 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Gm13597-201ENSMUST00000121239 375 ntBASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdhr3Q8BL00 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Gm27628-201ENSMUST00000184911 107 ntBASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Gm9182-201ENSMUST00000217829 639 ntBASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Gm15590-201ENSMUST00000078419 552 ntBASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Gm10154-201ENSMUST00000084445 354 ntBASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdhr3Q8BL00 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr3Q8BL00 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
Cdhr3Q8BL00 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr3Q8BL00 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdhr3Q8BL00 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr3Q8BL00 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr3Q8BL00 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdhr3Q8BL00 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdhr3Q8BL00 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Cdhr3Q8BL00 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms