Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp2bQ8BJF9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Gm27628-201ENSMUST00000184911 107 ntBASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp2bQ8BJF9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp2bQ8BJF9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms