Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Gm16198-201ENSMUST00000118766 670 ntBASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf38Q8BI21 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.91□□□□□ -0.18
Rnf38Q8BI21 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf38Q8BI21 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rnf38Q8BI21 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms