Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc5a7Q8BGY9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Gm6296-201ENSMUST00000222599 943 ntBASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc5a7Q8BGY9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Gm13464-201ENSMUST00000119418 935 ntBASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Gm8584-201ENSMUST00000171982 758 ntBASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms