Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trnp1Q80ZI1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Gm16177-201ENSMUST00000120728 718 ntBASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Gm8927-201ENSMUST00000181978 981 ntBASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Gm3222-201ENSMUST00000071282 990 ntBASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trnp1Q80ZI1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Gm12485-201ENSMUST00000119641 291 ntBASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Gm22331-201ENSMUST00000158066 136 ntBASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.06■□□□□ 0.16
Trnp1Q80ZI1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Gm14723-201ENSMUST00000118686 215 ntBASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Mir3102-201ENSMUST00000175555 104 ntBASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Gm38223-201ENSMUST00000194484 695 ntBASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms